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Microbiome reports with Kraken

We use a variety of data analysis tools such as OneCodex and Megan6 for quantifying and visualizing metagenomic sequencing datasets. Kraken2 is a popular taxonomic classification tool for metagenomic and microbiome sequencing results. The…
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Microbiome reports with Megan6

We use MEGAN6 to generate microbiome reports along with a host of other analytical and visualization tools.  Here is an example of a microbiome report from MEGAN6. Fig. 1 Fig. 1 shows a phylogram of a human nasopharyngeal sample displayed…
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Microbiome reports with One Codex

We use One Codex to generate microbiome reports along with a host of other analytical and visualization tools.  Here is an example of a microbiome report from One Codex.   Fig. 1 Rank-ordered Abundance Fig. 1 shows the rank-ordered…